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Species belonging to selected taxon:

Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST045693
species: Centaurea solstitialis
source: microPC, original name: miR319

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTC

miRNA*
GCTCCTTGAAGTCCAATAG

mismatches: 3
bulges: 0

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pre-miRNA
GAGCTCCTTGAAGTCCAATAGAGGATCTGAGTGGGAAGATAGTGCTGCTGGCTTATGGATTCCTCAAGTCCTATCTTTATGGTTTTGTATAGGCTTTGTG
GCTTGCATAACCCAGGAGCTTTATTACCTTACTTTATGATCTTTTTTTGGATTGAAGGGAGCTC


dot-bracket secondary structure
(((((((((..(((((((.((((((((.(((((((..(((((.(((.((((.(((((.(..((.((((.((((((...........).))))).)))).)
)..).))))).)))).))).)))))..)))))))...)))))))).)))))))..)))))))))



SIMILARITIES
miRBase vvi-MIR159c: 0.00000000003

PMRD vvi-miR159c: 0.00000000003

microPC miR159: 2e-77
UniProt no hits

RFAM MIR159: 0.0000000006

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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